HL_9B0P_114
3D structure
- PDB id
- 9B0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human Hibernating class1 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- CCGGGGUCGGCCCACGGCCCUGG
- Length
- 23 nucleotides
- Bulged bases
- 9B0P|1|S2|G|1760, 9B0P|1|S2|C|1762, 9B0P|1|S2|G|1763, 9B0P|1|S2|G|1764, 9B0P|1|S2|C|1765, 9B0P|1|S2|C|1766, 9B0P|1|S2|C|1767, 9B0P|1|S2|A|1768, 9B0P|1|S2|C|1769, 9B0P|1|S2|G|1770, 9B0P|1|S2|C|1774
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9B0P|1|S2|C|1755
9B0P|1|S2|C|1756
9B0P|1|S2|G|1757
9B0P|1|S2|G|1758
9B0P|1|S2|G|1759
9B0P|1|S2|G|1760
9B0P|1|S2|U|1761
9B0P|1|S2|C|1762
9B0P|1|S2|G|1763
9B0P|1|S2|G|1764
9B0P|1|S2|C|1765
9B0P|1|S2|C|1766
9B0P|1|S2|C|1767
9B0P|1|S2|A|1768
9B0P|1|S2|C|1769
9B0P|1|S2|G|1770
9B0P|1|S2|G|1771
9B0P|1|S2|C|1772
9B0P|1|S2|C|1773
9B0P|1|S2|C|1774
9B0P|1|S2|U|1775
9B0P|1|S2|G|1776
9B0P|1|S2|G|1777
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain LW
- Ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
Coloring options: