HL_9B0Q_124
3D structure
- PDB id
- 9B0Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-back di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCUAACACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B0Q_124 not in the Motif Atlas
- Homologous match to HL_6UFG_007
- Geometric discrepancy: 0.173
- The information below is about HL_6UFG_007
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
9B0Q|1|aP|C|31
9B0Q|1|aP|C|32
9B0Q|1|aP|U|33
9B0Q|1|aP|A|34
9B0Q|1|aP|A|35
9B0Q|1|aP|C|36
9B0Q|1|aP|A|37
9B0Q|1|aP|C|38
9B0Q|1|aP|G|39
Current chains
- Chain aP
- A/P site tRNA [Homo sapiens]
Nearby chains
- Chain cB
- Elongation factor 2
- Chain l5
- Large subunit ribosomal RNA; LSU rRNA
- Chain s2
- Small subunit ribosomal RNA; SSU rRNA
- Chain sX
- 40S ribosomal protein S23
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