HL_9B0Q_151

3D structure

PDB id

9B0Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-back di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUCUUGGGGCCGAAACGAUCUCAAC

Length

25 nucleotides

Bulged bases

9B0Q|1|l5|U|1757, 9B0Q|1|l5|A|1765, 9B0Q|1|l5|A|1766, 9B0Q|1|l5|A|1767, 9B0Q|1|l5|G|1769

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0Q|1|l5|G|1753
9B0Q|1|l5|U|1754
9B0Q|1|l5|C|1755
9B0Q|1|l5|U|1756
9B0Q|1|l5|U|1757
9B0Q|1|l5|G|1758
9B0Q|1|l5|G|1759
9B0Q|1|l5|G|1760
9B0Q|1|l5|G|1761
9B0Q|1|l5|C|1762
9B0Q|1|l5|C|1763
9B0Q|1|l5|G|1764
9B0Q|1|l5|A|1765
9B0Q|1|l5|A|1766
9B0Q|1|l5|A|1767
9B0Q|1|l5|C|1768
9B0Q|1|l5|G|1769
9B0Q|1|l5|A|1770
9B0Q|1|l5|U|1771
9B0Q|1|l5|C|1772
9B0Q|1|l5|U|1773
9B0Q|1|l5|C|1774
9B0Q|1|l5|A|1775
9B0Q|1|l5|A|1776
9B0Q|1|l5|C|1777

Current chains

Chain l5

28S rRNA [Homo sapiens]

Nearby chains

Chain aP

Transfer RNA; tRNA

Chain lD

Large ribosomal subunit protein uL18

Chain lI

Ribosomal protein uL16-like