HL_9B0Q_208

3D structure

PDB id

9B0Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-back di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUUCCUCC

Length

9 nucleotides

Bulged bases

9B0Q|1|l8|U|123, 9B0Q|1|l8|U|124, 9B0Q|1|l8|C|126

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0Q|1|l8|G|121
9B0Q|1|l8|G|122
9B0Q|1|l8|U|123
9B0Q|1|l8|U|124
9B0Q|1|l8|C|125
9B0Q|1|l8|C|126
9B0Q|1|l8|U|127
9B0Q|1|l8|C|128
9B0Q|1|l8|C|129

Current chains

Chain l8

RNA (156-MER)5.8S rRNA [Homo sapiens]

Nearby chains

Chain l5

Large subunit ribosomal RNA; LSU rRNA

Chain lX

60S ribosomal protein L23a