HL_9B0R_097

3D structure

PDB id

9B0R (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human hibernating class2 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.81 Å

Loop

Sequence

CCCGAGCCG

Length

9 nucleotides

Bulged bases

9B0R|1|S2|G|836, 9B0R|1|S2|G|838, 9B0R|1|S2|C|840

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0R|1|S2|C|833
9B0R|1|S2|C|834
9B0R|1|S2|C|835
9B0R|1|S2|G|836
9B0R|1|S2|A|837
9B0R|1|S2|G|838
9B0R|1|S2|C|839
9B0R|1|S2|C|840
9B0R|1|S2|G|841

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SY

40S ribosomal protein S24