HL_9B4Z_029
3D structure
- PDB id
- 9B4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CUGCAACUCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B4Z_029 not in the Motif Atlas
- Geometric match to HL_8B0X_026
- Geometric discrepancy: 0.0819
- The information below is about HL_8B0X_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_93658.1
- Basepair signature
- cWW-tWH-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9B4Z|1|AA|C|1314
9B4Z|1|AA|U|1315
9B4Z|1|AA|G|1316
9B4Z|1|AA|C|1317
9B4Z|1|AA|A|1318
9B4Z|1|AA|A|1319
9B4Z|1|AA|C|1320
9B4Z|1|AA|U|1321
9B4Z|1|AA|C|1322
9B4Z|1|AA|G|1323
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AM
- 30S ribosomal protein S13
- Chain AN
- 30S ribosomal protein S14
- Chain AS
- 30S ribosomal protein S19
Coloring options: