HL_9B4Z_036
3D structure
- PDB id
- 9B4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B4Z_036 not in the Motif Atlas
- Geometric match to HL_9MTS_102
- Geometric discrepancy: 0.0802
- The information below is about HL_9MTS_102
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
9B4Z|1|AX|G|32
9B4Z|1|AX|C|33
9B4Z|1|AX|U|34
9B4Z|1|AX|C|35
9B4Z|1|AX|A|36
9B4Z|1|AX|U|37
9B4Z|1|AX|A|38
9B4Z|1|AX|A|39
9B4Z|1|AX|C|40
Current chains
- Chain AX
- tRNA-fMet
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AI
- 30S ribosomal protein S9
- Chain AV
- mRNA
- Chain AY
- Transfer RNA; tRNA
Coloring options: