HL_9B51_008
3D structure
- PDB id
- 9B51 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B51_008 not in the Motif Atlas
- Geometric match to HL_8B0X_007
- Geometric discrepancy: 0.0578
- The information below is about HL_8B0X_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39665.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9B51|1|AA|A|320
9B51|1|AA|A|321
9B51|1|AA|C|322
9B51|1|AA|U|323
9B51|1|AA|G|324
9B51|1|AA|A|325
9B51|1|AA|G|326
9B51|1|AA|A|327
9B51|1|AA|C|328
9B51|1|AA|A|329
9B51|1|AA|C|330
9B51|1|AA|G|331
9B51|1|AA|G|332
9B51|1|AA|U|333
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AP
- 30S ribosomal protein S16
- Chain AT
- 30S ribosomal protein S20
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