HL_9B51_009

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9B51|1|AA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9B51_009 not in the Motif Atlas

Geometric match to HL_9AXU_040

Geometric discrepancy: 0.0854

The information below is about HL_9AXU_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

9B51|1|AA|C|342
9B51|1|AA|U|343
9B51|1|AA|A|344
9B51|1|AA|C|345
9B51|1|AA|G|346
9B51|1|AA|G|347

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain BK

50S ribosomal protein L14

Chain BP

50S ribosomal protein L19