HL_9B51_012

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

9B51|1|AA|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9B51_012 not in the Motif Atlas

Geometric match to HL_8B0X_011

Geometric discrepancy: 0.2066

The information below is about HL_8B0X_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98423.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9B51|1|AA|G|462
9B51|1|AA|U|463
9B51|1|AA|U|464
9B51|1|AA|A|465
9B51|1|AA|A|466
9B51|1|AA|U|467
9B51|1|AA|A|468
9B51|1|AA|C|469
9B51|1|AA|C|470

Current chains

Chain AA

16S ribosomal RNA

Nearby chains