HL_9B51_014

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GCUCAAC

Length

7 nucleotides

Bulged bases

9B51|1|AA|U|619

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9B51_014 not in the Motif Atlas

Geometric match to HL_8B0X_013

Geometric discrepancy: 0.0889

The information below is about HL_8B0X_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86621.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

9B51|1|AA|G|617
9B51|1|AA|C|618
9B51|1|AA|U|619
9B51|1|AA|C|620
9B51|1|AA|A|621
9B51|1|AA|A|622
9B51|1|AA|C|623

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S ribosomal protein S4

Chain AP

30S ribosomal protein S16