HL_9B51_039
3D structure
- PDB id
- 9B51 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CCUCACAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B51_039 not in the Motif Atlas
- Geometric match to HL_1U0B_002
- Geometric discrepancy: 0.3308
- The information below is about HL_1U0B_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
9B51|1|AY|C|31
9B51|1|AY|C|32
9B51|1|AY|U|33
9B51|1|AY|C|34
9B51|1|AY|A|35
9B51|1|AY|C|36
9B51|1|AY|A|37
9B51|1|AY|A|38
9B51|1|AY|G|39
Current chains
- Chain AY
- tRNA-Val
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AG
- 30S ribosomal protein S7
- Chain AK
- 30S ribosomal protein S11
- Chain AV
- mRNA
- Chain AX
- Transfer RNA; tRNA
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