HL_9B51_061

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9B51_061 not in the Motif Atlas

Geometric match to HL_8B0X_052

Geometric discrepancy: 0.0692

The information below is about HL_8B0X_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98423.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9B51|1|BA|G|712
9B51|1|BA|G|713
9B51|1|BA|U|714
9B51|1|BA|A|715
9B51|1|BA|A|716
9B51|1|BA|C|717
9B51|1|BA|A|718
9B51|1|BA|C|719

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain AO

30S ribosomal protein S15