HL_9B51_102

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9B51_102 not in the Motif Atlas

Geometric match to HL_8B0X_090

Geometric discrepancy: 0.0487

The information below is about HL_8B0X_090

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

9B51|1|BA|C|2594
9B51|1|BA|G|2595
9B51|1|BA|U|2596
9B51|1|BA|G|2597
9B51|1|BA|A|2598
9B51|1|BA|G|2599

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AX

Transfer RNA; tRNA

Chain BC

50S ribosomal protein L2