HL_9BDL_060

3D structure

PDB id

9BDL (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCCGAAACGAUC

Length

12 nucleotides

Bulged bases

9BDL|1|A28S|C|1768

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDL|1|A28S|G|1761
9BDL|1|A28S|C|1762
9BDL|1|A28S|C|1763
9BDL|1|A28S|G|1764
9BDL|1|A28S|A|1765
9BDL|1|A28S|A|1766
9BDL|1|A28S|A|1767
9BDL|1|A28S|C|1768
9BDL|1|A28S|G|1769
9BDL|1|A28S|A|1770
9BDL|1|A28S|U|1771
9BDL|1|A28S|C|1772

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AS18

40S ribosomal protein S18