HL_9BDP_034
3D structure
- PDB id
- 9BDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUGAAUUUAAGCAUAUUAGUCAG
- Length
- 23 nucleotides
- Bulged bases
- 9BDP|1|A28S|A|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BDP|1|A28S|C|30
9BDP|1|A28S|U|31
9BDP|1|A28S|G|32
9BDP|1|A28S|A|33
9BDP|1|A28S|A|34
9BDP|1|A28S|U|35
9BDP|1|A28S|U|36
9BDP|1|A28S|U|37
9BDP|1|A28S|A|38
9BDP|1|A28S|A|39
9BDP|1|A28S|G|40
9BDP|1|A28S|C|41
9BDP|1|A28S|A|42
9BDP|1|A28S|U|43
9BDP|1|A28S|A|44
9BDP|1|A28S|U|45
9BDP|1|A28S|U|46
9BDP|1|A28S|A|47
9BDP|1|A28S|G|48
9BDP|1|A28S|U|49
9BDP|1|A28S|C|50
9BDP|1|A28S|A|51
9BDP|1|A28S|G|52
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL13
- Large ribosomal subunit protein eL13
- Chain AL15
- 60S ribosomal protein L15
- Chain AL28
- 60S ribosomal protein L27a
- Chain AL37
- 60S ribosomal protein L37
- Chain AL42
- eL42
Coloring options: