HL_9BDP_110
3D structure
- PDB id
- 9BDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUGAAUUGCAGGUUGAUC
- Length
- 18 nucleotides
- Bulged bases
- 9BDP|1|A58S|U|86
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BDP|1|A58S|G|68
9BDP|1|A58S|U|69
9BDP|1|A58S|G|70
9BDP|1|A58S|A|71
9BDP|1|A58S|A|72
9BDP|1|A58S|U|73
9BDP|1|A58S|U|74
9BDP|1|A58S|G|75
9BDP|1|A58S|C|76
9BDP|1|A58S|A|77
9BDP|1|A58S|G|78
9BDP|1|A58S|G|79
9BDP|1|A58S|U|85
9BDP|1|A58S|U|86
9BDP|1|A58S|G|87
9BDP|1|A58S|A|88
9BDP|1|A58S|U|89
9BDP|1|A58S|C|90
Current chains
- Chain A58S
- 5.8S rRNA
Nearby chains
- Chain A28S
- Large subunit ribosomal RNA; LSU rRNA
- Chain AL26
- 60S ribosomal protein L26
- Chain AL35
- 60S ribosomal protein L35
- Chain AL37
- 60S ribosomal protein L37
- Chain AL39
- 60S ribosomal protein L39
Coloring options: