HL_9BDP_124

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGUAAUUCU

Length

9 nucleotides

Bulged bases

9BDP|1|A18S|U|161

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A18S|G|155
9BDP|1|A18S|G|156
9BDP|1|A18S|U|157
9BDP|1|A18S|A|158
9BDP|1|A18S|A|159
9BDP|1|A18S|U|160
9BDP|1|A18S|U|161
9BDP|1|A18S|C|162
9BDP|1|A18S|U|163

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS06

40S ribosomal protein S6

Chain AS24

40S ribosomal protein S24

Chain EF1A

Elongation factor 1-alpha