HL_9BDP_128

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAUUGAUAGCUC

Length

12 nucleotides

Bulged bases

9BDP|1|A18S|U|1300, 9BDP|1|A18S|G|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A18S|G|1294
9BDP|1|A18S|A|1295
9BDP|1|A18S|U|1296
9BDP|1|A18S|U|1297
9BDP|1|A18S|G|1298
9BDP|1|A18S|A|1299
9BDP|1|A18S|U|1300
9BDP|1|A18S|A|1301
9BDP|1|A18S|G|1302
9BDP|1|A18S|C|1303
9BDP|1|A18S|U|1304
9BDP|1|A18S|C|1305

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS15

40S ribosomal protein S15

Chain AS29

40S ribosomal protein S29