HL_9BDP_133

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGGGAGGCCGGCCGCCGGUGAAAUACCA

Length

28 nucleotides

Bulged bases

9BDP|1|A28S|G|4035

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|U|3968
9BDP|1|A28S|G|3969
9BDP|1|A28S|G|3970
9BDP|1|A28S|G|3971
9BDP|1|A28S|A|3972
9BDP|1|A28S|G|3973
9BDP|1|A28S|G|3974
9BDP|1|A28S|C|3975
9BDP|1|A28S|C|3976
9BDP|1|A28S|G|4035
9BDP|1|A28S|G|4036
9BDP|1|A28S|C|4037
9BDP|1|A28S|C|4038
9BDP|1|A28S|G|4039
9BDP|1|A28S|C|4040
9BDP|1|A28S|C|4041
9BDP|1|A28S|G|4042
9BDP|1|A28S|G|4043
9BDP|1|A28S|U|4044
9BDP|1|A28S|G|4045
9BDP|1|A28S|A|4046
9BDP|1|A28S|A|4047
9BDP|1|A28S|A|4048
9BDP|1|A28S|U|4049
9BDP|1|A28S|A|4050
9BDP|1|A28S|C|4051
9BDP|1|A28S|C|4052
9BDP|1|A28S|A|4053

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain ETRN

Transfer RNA; tRNA