HL_9BDP_137
3D structure
- PDB id
- 9BDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGCUCAUAACC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9BDP_137 not in the Motif Atlas
- Homologous match to HL_4WZD_209
- Geometric discrepancy: 0.4088
- The information below is about HL_4WZD_209
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BDP|1|ETRN|G|30
9BDP|1|ETRN|G|31
9BDP|1|ETRN|C|32
9BDP|1|ETRN|U|33
9BDP|1|ETRN|C|34
9BDP|1|ETRN|A|35
9BDP|1|ETRN|U|36
9BDP|1|ETRN|A|37
9BDP|1|ETRN|A|38
9BDP|1|ETRN|C|39
9BDP|1|ETRN|C|40
Current chains
- Chain ETRN
- tRNAfMet
Nearby chains
- Chain A18S
- Small subunit ribosomal RNA; SSU rRNA
- Chain AS05
- Ribosomal protein S5
- Chain AS14
- Small ribosomal subunit protein uS11
- Chain AS28
- 40S ribosomal protein S28
- Chain MRNA
- mRNA
- Chain PTRN
- Transfer RNA; tRNA
Coloring options: