HL_9BLN_017

3D structure

PDB id

9BLN (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUUCUAUUUUGUUGGUUUUCGGAAC

Length

25 nucleotides

Bulged bases

9BLN|1|A|G|891, 9BLN|1|A|U|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BLN|1|A|G|881
9BLN|1|A|U|882
9BLN|1|A|U|883
9BLN|1|A|C|884
9BLN|1|A|U|885
9BLN|1|A|A|886
9BLN|1|A|U|887
9BLN|1|A|U|888
9BLN|1|A|U|889
9BLN|1|A|U|890
9BLN|1|A|G|891
9BLN|1|A|U|892
9BLN|1|A|U|893
9BLN|1|A|G|894
9BLN|1|A|G|895
9BLN|1|A|U|896
9BLN|1|A|U|897
9BLN|1|A|U|898
9BLN|1|A|U|899
9BLN|1|A|C|900
9BLN|1|A|G|901
9BLN|1|A|G|902
9BLN|1|A|A|903
9BLN|1|A|A|904
9BLN|1|A|C|905

Current chains

Chain A

rRNA

Nearby chains

Chain B

Small ribosomal subunit protein uS17