HL_9BLN_032
3D structure
- PDB id
- 9BLN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUCAUAAGC
- Length
- 9 nucleotides
- Bulged bases
- 9BLN|1|A|G|1665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9BLN_032 not in the Motif Atlas
- Homologous match to HL_4V88_220
- Geometric discrepancy: 0.2647
- The information below is about HL_4V88_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9BLN|1|A|G|1658
9BLN|1|A|U|1659
9BLN|1|A|C|1660
9BLN|1|A|A|1661
9BLN|1|A|U|1662
9BLN|1|A|A|1663
9BLN|1|A|A|1664
9BLN|1|A|G|1665
9BLN|1|A|C|1666
Current chains
- Chain A
- rRNA
Nearby chains
- Chain Y
- Small ribosomal subunit protein uS9
- Chain d
- Small ribosomal subunit protein eS19
- Chain h
- Small ribosomal subunit protein uS10
- Chain i
- Small ribosomal subunit protein uS14
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