HL_9BLN_035

3D structure

PDB id

9BLN (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AGGACUCUUUCGAGGCCCU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BLN|1|A|A|533
9BLN|1|A|G|534
9BLN|1|A|G|535
9BLN|1|A|A|536
9BLN|1|A|C|537
9BLN|1|A|U|538
9BLN|1|A|C|539
9BLN|1|A|U|540
9BLN|1|A|U|541
9BLN|1|A|U|542
9BLN|1|A|C|543
9BLN|1|A|G|544
9BLN|1|A|A|545
9BLN|1|A|G|546
9BLN|1|A|G|547
9BLN|1|A|C|548
9BLN|1|A|C|549
9BLN|1|A|C|550
9BLN|1|A|U|551

Current chains

Chain A

rRNA

Nearby chains

Chain D

Small ribosomal subunit protein uS4

Chain F

Small ribosomal subunit protein eS30

Chain U

Eukaryotic translation initiation factor 3 subunit B