HL_9BS0_024
3D structure
- PDB id
- 9BS0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- YphC-treated 45SYphC particle. Class 5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UGAAAUG
- Length
- 7 nucleotides
- Bulged bases
- 9BS0|1|A|A|828, 9BS0|1|A|U|831
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9BS0_024 not in the Motif Atlas
- Homologous match to HL_7A0S_023
- Geometric discrepancy: 0.1626
- The information below is about HL_7A0S_023
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_91813.1
- Basepair signature
- cWW-cSW-F
- Number of instances in this motif group
- 24
Unit IDs
9BS0|1|A|U|826
9BS0|1|A|G|827
9BS0|1|A|A|828
9BS0|1|A|A|829
9BS0|1|A|A|830
9BS0|1|A|U|831
9BS0|1|A|G|832
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- Large ribosomal subunit protein uL2
Coloring options: