3D structure

PDB id
9BS0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
YphC-treated 45SYphC particle. Class 5
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CGAAAUAUAGUAG
Length
13 nucleotides
Bulged bases
9BS0|1|A|A|1583, 9BS0|1|A|A|1585
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9BS0|1|A|C|1577
9BS0|1|A|G|1578
9BS0|1|A|A|1579
9BS0|1|A|A|1580
9BS0|1|A|A|1581
9BS0|1|A|U|1582
9BS0|1|A|A|1583
9BS0|1|A|U|1584
9BS0|1|A|A|1585
9BS0|1|A|G|1586
9BS0|1|A|U|1587
9BS0|1|A|A|1588
9BS0|1|A|G|1589

Current chains

Chain A
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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