HL_9BSS_050

3D structure

PDB id

9BSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

45SRbgA particle in complex with RbgA and YphC. Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

9BSS|1|A|C|2825

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9BSS_050 not in the Motif Atlas

Geometric match to HL_361D_002

Geometric discrepancy: 0.3333

The information below is about HL_361D_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

9BSS|1|A|C|2823
9BSS|1|A|G|2824
9BSS|1|A|C|2825
9BSS|1|A|A|2826
9BSS|1|A|A|2827
9BSS|1|A|G|2828

Current chains

Chain A

23S rRNA

Nearby chains