HL_9C6I_005

3D structure

PDB id

9C6I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a group IIC intron RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

UGCAUAACAA

Length

10 nucleotides

Bulged bases

9C6I|1|A|G|179, 9C6I|1|A|C|180

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C6I|1|A|U|178
9C6I|1|A|G|179
9C6I|1|A|C|180
9C6I|1|A|A|181
9C6I|1|A|U|182
9C6I|1|A|A|183
9C6I|1|A|A|184
9C6I|1|A|C|185
9C6I|1|A|A|186
9C6I|1|A|A|187

Current chains

Chain A

Group IIC Intron

Nearby chains