HL_9C8K_024

3D structure

PDB id

9C8K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGACCCCCGAGCGG

Length

14 nucleotides

Bulged bases

9C8K|1|1|C|1419, 9C8K|1|1|G|1420

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C8K|1|1|C|1412
9C8K|1|1|G|1413
9C8K|1|1|A|1414
9C8K|1|1|C|1415
9C8K|1|1|C|1416
9C8K|1|1|C|1417
9C8K|1|1|C|1418
9C8K|1|1|C|1419
9C8K|1|1|G|1420
9C8K|1|1|A|1421
9C8K|1|1|G|1422
9C8K|1|1|C|1423
9C8K|1|1|G|1424
9C8K|1|1|G|1425

Current chains

Chain 1

18S ribosomal RNA

Nearby chains

Chain Q

uS9

Chain T

40S ribosomal protein eS19