HL_9CG5_039
3D structure
- PDB id
- 9CG5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex (tRNA-fMet M1 + UUG start codon)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 9CG5|1|a|A|196, 9CG5|1|a|A|199
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9CG5_039 not in the Motif Atlas
- Homologous match to HL_5J7L_139
- Geometric discrepancy: 0.0711
- The information below is about HL_5J7L_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_30068.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
9CG5|1|a|G|194
9CG5|1|a|A|195
9CG5|1|a|A|196
9CG5|1|a|A|197
9CG5|1|a|C|198
9CG5|1|a|A|199
9CG5|1|a|U|200
9CG5|1|a|C|201
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain k
- 50S ribosomal protein L15
- Chain w
- 50S ribosomal protein L28
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