HL_9CN3_010

3D structure

PDB id

9CN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 39S mitoribosome in complex with antibiotic Linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

UCUUAG

Length

6 nucleotides

Bulged bases

9CN3|1|A|C|2036, 9CN3|1|A|A|2039

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9CN3_010 not in the Motif Atlas

Homologous match to HL_9DFE_023

Geometric discrepancy: 0.4515

The information below is about HL_9DFE_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.2

Basepair signature

cWW-F-F

Number of instances in this motif group

11

Unit IDs

9CN3|1|A|U|2035
9CN3|1|A|C|2036
9CN3|1|A|U|2037
9CN3|1|A|U|2038
9CN3|1|A|A|2039
9CN3|1|A|G|2040

Current chains

Chain A

16S rRNA

Nearby chains

Chain M

39S ribosomal protein L15, mitochondrial