HL_9CN3_022

3D structure

PDB id

9CN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 39S mitoribosome in complex with antibiotic Linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

AGCAUCACCAGUAUU

Length

15 nucleotides

Bulged bases

9CN3|1|A|A|2521, 9CN3|1|A|U|2522, 9CN3|1|A|C|2523, 9CN3|1|A|A|2527, 9CN3|1|A|U|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9CN3|1|A|A|2518
9CN3|1|A|G|2519
9CN3|1|A|C|2520
9CN3|1|A|A|2521
9CN3|1|A|U|2522
9CN3|1|A|C|2523
9CN3|1|A|A|2524
9CN3|1|A|C|2525
9CN3|1|A|C|2526
9CN3|1|A|A|2527
9CN3|1|A|G|2528
9CN3|1|A|U|2529
9CN3|1|A|A|2530
9CN3|1|A|U|2531
9CN3|1|A|U|2532

Current chains

Chain A

16S rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial