HL_9CN3_023

3D structure

PDB id

9CN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 39S mitoribosome in complex with antibiotic Linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

CACAUG

Length

6 nucleotides

Bulged bases

9CN3|1|A|C|2557, 9CN3|1|A|A|2558, 9CN3|1|A|U|2559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9CN3_023 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.118

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.10

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

9CN3|1|A|C|2555
9CN3|1|A|A|2556
9CN3|1|A|C|2557
9CN3|1|A|A|2558
9CN3|1|A|U|2559
9CN3|1|A|G|2560

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial