HL_9CN3_035

3D structure

PDB id

9CN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 39S mitoribosome in complex with antibiotic Linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9CN3_035 not in the Motif Atlas

Geometric match to HL_7QQX_003

Geometric discrepancy: 0.2222

The information below is about HL_7QQX_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

9CN3|1|A|C|3126
9CN3|1|A|G|3127
9CN3|1|A|A|3128
9CN3|1|A|A|3129
9CN3|1|A|A|3130
9CN3|1|A|G|3131

Current chains

Chain A

16S rRNA

Nearby chains