HL_9DUL_009

3D structure

PDB id

9DUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of mutant 30S subunit with extended helix 26, version 4

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9DUL_009 not in the Motif Atlas

Homologous match to HL_4LFB_010

Geometric discrepancy: 0.1333

The information below is about HL_4LFB_010

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

9DUL|1|A|C|379
9DUL|1|A|G|380
9DUL|1|A|C|381
9DUL|1|A|A|382
9DUL|1|A|A|383
9DUL|1|A|G|384

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16