HL_9DUL_019
3D structure
- PDB id
- 9DUL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of mutant 30S subunit with extended helix 26, version 4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- GAUC(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 9DUL|1|A|C|966, 9DUL|1|A|5MC|967, 9DUL|1|A|A|968, 9DUL|1|A|G|971
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9DUL_019 not in the Motif Atlas
- Geometric match to HL_4RUM_001
- Geometric discrepancy: 0.3679
- The information below is about HL_4RUM_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86834.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9DUL|1|A|G|963
9DUL|1|A|A|964
9DUL|1|A|U|965
9DUL|1|A|C|966
9DUL|1|A|5MC|967
9DUL|1|A|A|968
9DUL|1|A|A|969
9DUL|1|A|C|970
9DUL|1|A|G|971
9DUL|1|A|C|972
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain I
- Small ribosomal subunit protein uS9
- Chain J
- Small ribosomal subunit protein uS10
- Chain M
- Small ribosomal subunit protein uS13
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