HL_9DXL_006
3D structure
- PDB id
- 9DXL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RhoBAST RNA aptamer in complex with the SpyRho555 analogue, MaP555
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GCAAGGUUAACC
- Length
- 12 nucleotides
- Bulged bases
- 9DXL|1|B|U|32, 9DXL|1|B|C|36
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9DXL|1|B|G|26
9DXL|1|B|C|27
9DXL|1|B|A|28
9DXL|1|B|A|29
9DXL|1|B|G|30
9DXL|1|B|G|31
9DXL|1|B|U|32
9DXL|1|B|U|33
9DXL|1|B|A|34
9DXL|1|B|A|35
9DXL|1|B|C|36
9DXL|1|B|C|37
Current chains
- Chain B
- RhoBAST aptamer
Nearby chains
- Chain A
- RhoBAST aptamer
Coloring options: