HL_9E7G_002
3D structure
- PDB id
- 9E7G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of HIV-1 RRE SLII G34C mutant in complex with Fab BL3-6
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAAACAC
- Length
- 7 nucleotides
- Bulged bases
- 9E7G|1|R|A|50, 9E7G|1|R|A|52
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E7G_002 not in the Motif Atlas
- Geometric match to HL_7MLX_002
- Geometric discrepancy: 0.0949
- The information below is about HL_7MLX_002
- Detailed Annotation
- Fab BL3-6 binding hairpin with tSW
- Broad Annotation
- No text annotation
- Motif group
- HL_64036.3
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 28
Unit IDs
9E7G|1|R|G|49
9E7G|1|R|A|50
9E7G|1|R|A|51
9E7G|1|R|A|52
9E7G|1|R|C|53
9E7G|1|R|A|54
9E7G|1|R|C|55
Current chains
- Chain R
- Rev Response Element SLII
Nearby chains
- Chain H
- BL3-6 Fab heavy chain
- Chain L
- BL3-6 Fab light chain
Coloring options: