HL_9EBB_004
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGGGAGGCUG
- Length
- 10 nucleotides
- Bulged bases
- 9EBB|1|I|G|60
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9EBB_004 not in the Motif Atlas
- Homologous match to HL_8B0X_033
- Geometric discrepancy: 0.4702
- The information below is about HL_8B0X_033
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35677.5
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9EBB|1|I|U|59
9EBB|1|I|G|60
9EBB|1|I|G|61
9EBB|1|I|G|62
9EBB|1|I|A|63
9EBB|1|I|G|64
9EBB|1|I|G|65
9EBB|1|I|C|66
9EBB|1|I|U|67
9EBB|1|I|G|68
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 1
- DUF5302 domain-containing protein
- Chain 2
- 50S ribosomal protein bL34
- Chain T
- 50S ribosomal protein L23
- Chain Y
- 50S ribosomal protein L29
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