HL_9EBB_014

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUGGGAUG

Length

8 nucleotides

Bulged bases

9EBB|1|I|U|394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9EBB_014 not in the Motif Atlas

Homologous match to HL_8B0X_041

Geometric discrepancy: 0.1674

The information below is about HL_8B0X_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13999.5

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

24

Unit IDs

9EBB|1|I|C|388
9EBB|1|I|U|389
9EBB|1|I|G|390
9EBB|1|I|G|391
9EBB|1|I|G|392
9EBB|1|I|A|393
9EBB|1|I|U|394
9EBB|1|I|G|395

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain U

50S ribosomal protein L24