HL_9EBB_026

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAUACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9EBB_026 not in the Motif Atlas

Geometric match to HL_9DFE_044

Geometric discrepancy: 0.3276

The information below is about HL_9DFE_044

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9EBB|1|I|C|767
9EBB|1|I|A|768
9EBB|1|I|U|769
9EBB|1|I|A|770
9EBB|1|I|C|771
9EBB|1|I|G|772

Current chains

Chain I

23S ribosomal RNA

Nearby chains