HL_9EBB_049

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCUUGCG

Length

7 nucleotides

Bulged bases

9EBB|1|I|U|1963, 9EBB|1|I|C|1966

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9EBB_049 not in the Motif Atlas

Geometric match to HL_7A0S_007

Geometric discrepancy: 0.254

The information below is about HL_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_23875.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

16

Unit IDs

9EBB|1|I|C|1961
9EBB|1|I|C|1962
9EBB|1|I|U|1963
9EBB|1|I|U|1964
9EBB|1|I|G|1965
9EBB|1|I|C|1966
9EBB|1|I|G|1967

Current chains

Chain I

23S ribosomal RNA

Nearby chains