HL_9EBB_054
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 9EBB|1|I|A|2151
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9EBB_054 not in the Motif Atlas
- Homologous match to HL_8B0X_076
- Geometric discrepancy: 0.5473
- The information below is about HL_8B0X_076
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.3
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9EBB|1|I|G|2148
9EBB|1|I|U|2149
9EBB|1|I|A|2150
9EBB|1|I|A|2151
9EBB|1|I|C|2152
9EBB|1|I|U|2153
9EBB|1|I|A|2154
9EBB|1|I|U|2155
9EBB|1|I|A|2156
9EBB|1|I|A|2157
9EBB|1|I|C|2158
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain A
- Ribosome hibernation promoting factor
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: