HL_9EBB_066
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AGUCCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9EBB_066 not in the Motif Atlas
- Homologous match to HL_8B0X_087
- Geometric discrepancy: 0.1337
- The information below is about HL_8B0X_087
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.3
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9EBB|1|I|A|2709
9EBB|1|I|G|2710
9EBB|1|I|U|2711
9EBB|1|I|C|2712
9EBB|1|I|C|2713
9EBB|1|I|A|2714
9EBB|1|I|U|2715
9EBB|1|I|A|2716
9EBB|1|I|U|2717
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain M
- 50S ribosomal protein L16
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