HL_9EBB_096
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAUGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 9EBB|1|a|G|964
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9EBB_096 not in the Motif Atlas
- Homologous match to HL_8B0X_019
- Geometric discrepancy: 0.1952
- The information below is about HL_8B0X_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9EBB|1|a|G|956
9EBB|1|a|A|957
9EBB|1|a|U|958
9EBB|1|a|G|959
9EBB|1|a|C|960
9EBB|1|a|A|961
9EBB|1|a|A|962
9EBB|1|a|C|963
9EBB|1|a|G|964
9EBB|1|a|C|965
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Ribosome hibernation promoting factor
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain m
- 30S ribosomal protein S13
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