HL_9EBB_103
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUGCAACUCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9EBB_103 not in the Motif Atlas
- Homologous match to HL_8B0X_026
- Geometric discrepancy: 0.1398
- The information below is about HL_8B0X_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_93658.1
- Basepair signature
- cWW-tWH-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9EBB|1|a|C|1306
9EBB|1|a|U|1307
9EBB|1|a|G|1308
9EBB|1|a|C|1309
9EBB|1|a|A|1310
9EBB|1|a|A|1311
9EBB|1|a|C|1312
9EBB|1|a|U|1313
9EBB|1|a|C|1314
9EBB|1|a|G|1315
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain 9
- Small ribosomal subunit protein uS14
- Chain m
- 30S ribosomal protein S13
- Chain s
- 30S ribosomal protein S19
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