HL_9EC3_031

3D structure

PDB id

9EC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

GGUUGGCUUAGAAGCAGCCACCC

Length

23 nucleotides

Bulged bases

9EC3|1|I|U|1190, 9EC3|1|I|A|1196, 9EC3|1|I|A|1199, 9EC3|1|I|C|1207

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EC3|1|I|G|1187
9EC3|1|I|G|1188
9EC3|1|I|U|1189
9EC3|1|I|U|1190
9EC3|1|I|G|1191
9EC3|1|I|G|1192
9EC3|1|I|C|1193
9EC3|1|I|U|1194
9EC3|1|I|U|1195
9EC3|1|I|A|1196
9EC3|1|I|G|1197
9EC3|1|I|A|1198
9EC3|1|I|A|1199
9EC3|1|I|G|1200
9EC3|1|I|C|1201
9EC3|1|I|A|1202
9EC3|1|I|G|1203
9EC3|1|I|C|1204
9EC3|1|I|C|1205
9EC3|1|I|A|1206
9EC3|1|I|C|1207
9EC3|1|I|C|1208
9EC3|1|I|C|1209

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L16