HL_9EC3_097

3D structure

PDB id

9EC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

9EC3|1|a|G|1085

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9EC3_097 not in the Motif Atlas

Homologous match to HL_8B0X_022

Geometric discrepancy: 0.1438

The information below is about HL_8B0X_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_63894.4

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

22

Unit IDs

9EC3|1|a|G|1080
9EC3|1|a|U|1081
9EC3|1|a|U|1082
9EC3|1|a|A|1083
9EC3|1|a|A|1084
9EC3|1|a|G|1085
9EC3|1|a|U|1086
9EC3|1|a|C|1087

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7