HL_9EC3_110
3D structure
- PDB id
- 9EC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- 9EC3|1|u|U|55
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9EC3_110 not in the Motif Atlas
- Homologous match to HL_8VU0_003
- Geometric discrepancy: 0.1394
- The information below is about HL_8VU0_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.7
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 139
Unit IDs
9EC3|1|u|G|53
9EC3|1|u|U|54
9EC3|1|u|U|55
9EC3|1|u|C|56
9EC3|1|u|A|57
9EC3|1|u|A|58
9EC3|1|u|A|59
9EC3|1|u|U|60
9EC3|1|u|C|61
Current chains
- Chain u
- E-tRNA, fMet-tRNA(fMet)
Nearby chains
- Chain F
- 50S ribosomal protein L5
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain M
- 50S ribosomal protein L16
Coloring options: