HL_9EHO_055
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGAACGCCUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 9EHO|1|5|G|4825, 9EHO|1|5|C|4829
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|5|C|4819
9EHO|1|5|U|4820
9EHO|1|5|G|4821
9EHO|1|5|A|4822
9EHO|1|5|A|4823
9EHO|1|5|C|4824
9EHO|1|5|G|4825
9EHO|1|5|C|4826
9EHO|1|5|C|4827
9EHO|1|5|U|4828
9EHO|1|5|C|4829
9EHO|1|5|U|4830
9EHO|1|5|A|4831
9EHO|1|5|A|4832
9EHO|1|5|G|4833
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain H
- Large ribosomal subunit protein uL6
- Chain O
- Large ribosomal subunit protein uL13
- Chain m
- Ubiquitin-ribosomal protein eL40 fusion protein
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